Temporary header file '/tmp/z0sztvUUAl/dump1.h' with the following content will be compiled to create GCC translation unit dump: // add defines #define __STDC_VERSION__ 201710L #define _GXX_NULLPTR_T #define CLUTTER_ENABLE_COMPOSITOR_API 1 #define _REGEX_NELTS(n) #define _Atomic #define PACKED #define getaddrinfo_a(a,b,c,d) // add includes #include "/usr/include/proteowizard/libraries/CSpline/CSpline.h" #include "/usr/include/proteowizard/libraries/Eigen/nnls.h" #include "/usr/include/proteowizard/libraries/boost_aux/boost/enum/base.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/enum/bitfield.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/enum/iterator.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/enum/macros.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/enum.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/foreach_field.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/interprocess/detail/win32_api.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/iostreams/arbitrary_positional_facade.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/iostreams/filter/base64.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/args.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/cenv.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/config.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/convert.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/cstdio.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/cstdlib.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/filebuf.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/fstream.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/iostream.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/stackstring.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/system.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/nowide/windows.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/utility/detail/member_dereference.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/utility/detail/restricted.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/utility/detail/singleton_manager.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/utility/mutexed_singleton.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/utility/singleton.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/boost/utility/thread_specific_singleton.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/tools/bcp/bcp.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/tools/bcp/bcp_imp.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/tools/bcp/fileview.hpp" #include "/usr/include/proteowizard/libraries/boost_aux/tools/bcp/licence_info.hpp" #include "/usr/include/proteowizard/libraries/doctest.h" #include "/usr/include/proteowizard/libraries/libsvm-3.0/svm.h" #include "/usr/include/proteowizard/pwiz/Version.hpp" #include "/usr/include/proteowizard/pwiz/analysis/Version.hpp" #include "/usr/include/proteowizard/pwiz/analysis/chromatogram_processing/ChromatogramListFactory.hpp" #include "/usr/include/proteowizard/pwiz/analysis/chromatogram_processing/ChromatogramListWrapper.hpp" #include "/usr/include/proteowizard/pwiz/analysis/chromatogram_processing/ChromatogramList_Filter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/chromatogram_processing/ChromatogramList_LockmassRefiner.hpp" #include "/usr/include/proteowizard/pwiz/analysis/chromatogram_processing/ChromatogramList_SavitzkyGolaySmoother.hpp" #include "/usr/include/proteowizard/pwiz/analysis/chromatogram_processing/ChromatogramList_XICGenerator.hpp" #include "/usr/include/proteowizard/pwiz/analysis/chromatogram_processing/SavitzkyGolaySmoother.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/CwtPeakDetector.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/DataFilter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/ExtraZeroSamplesFilter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/LocalMaximumPeakDetector.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/PeakDetector.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/SavitzkyGolaySmoother.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/Smoother.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/WhittakerSmoother.hpp" #include "/usr/include/proteowizard/pwiz/analysis/common/ZeroSampleFiller.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/CubicHermiteSpline.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/DemuxDebugReader.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/DemuxDebugWriter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/DemuxHelpers.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/DemuxSolver.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/DemuxTypes.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/EnumConstantNotPresentException.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/IDemultiplexer.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/IInterpolation.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/IPrecursorMaskCodec.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/MSXDemultiplexer.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/MatrixIO.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/OverlapDemultiplexer.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/PrecursorMaskCodec.hpp" #include "/usr/include/proteowizard/pwiz/analysis/demux/SpectrumPeakExtractor.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/DerivativeTest.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/FrequencyEstimator.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/FrequencyEstimatorPhysicalModel.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/FrequencyEstimatorSimple.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/MagnitudeLorentzian.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/MagnitudeLorentzianTestData.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/ParameterEstimator.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/ParametrizedFunction.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/PeakDetector.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/PeakDetectorMatchedFilter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/PeakDetectorMatchedFilterTestData.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/PeakDetectorNaive.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/TruncatedLorentzian.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/TruncatedLorentzianEstimator.hpp" #include "/usr/include/proteowizard/pwiz/analysis/frequency/TruncatedLorentzianParameters.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/MSDataAnalyzer.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/MSDataCache.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/MetadataReporter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/PepXMLCat.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/RegionAnalyzer.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/RegionSIC.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/RegionSlice.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/RegionTIC.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/RunSummary.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/SpectrumBinaryData.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/SpectrumTable.hpp" #include "/usr/include/proteowizard/pwiz/analysis/passive/TabularConfig.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/FeatureDetector.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/FeatureDetectorPeakel.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/FeatureDetectorSimple.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/FeatureModeler.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/MZRTField.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/Noise.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/PeakExtractor.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/PeakFamilyDetector.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/PeakFamilyDetectorFT.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/PeakFinder.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/PeakFitter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/PeakelGrower.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peakdetect/PeakelPicker.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peptideid/PeptideID.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peptideid/PeptideIDMap.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peptideid/PeptideID_flat.hpp" #include "/usr/include/proteowizard/pwiz/analysis/peptideid/PeptideID_pepXML.hpp" #include "/usr/include/proteowizard/pwiz/analysis/proteome_processing/ProteinListFactory.hpp" #include "/usr/include/proteowizard/pwiz/analysis/proteome_processing/ProteinList_DecoyGenerator.hpp" #include "/usr/include/proteowizard/pwiz/analysis/proteome_processing/ProteinList_Filter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/MS2Deisotoper.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/MS2NoiseFilter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/PrecursorMassFilter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/PrecursorRecalculator.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefault.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumListFactory.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_3D.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotope.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculator.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_Filter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_IonMobility.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefiner.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_MZRefiner.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_MZWindow.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixer.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_PeakFilter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_PeakPicker.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculator.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefine.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_ScanSummer.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_Smoother.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_Sorter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_TitleMaker.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/SpectrumList_ZeroSamplesFilter.hpp" #include "/usr/include/proteowizard/pwiz/analysis/spectrum_processing/ThresholdFilter.hpp" #include "/usr/include/proteowizard/pwiz/data/common/BinaryIndexStream.hpp" #include "/usr/include/proteowizard/pwiz/data/common/CVTranslator.hpp" #include "/usr/include/proteowizard/pwiz/data/common/Index.hpp" #include "/usr/include/proteowizard/pwiz/data/common/MemoryIndex.hpp" #include "/usr/include/proteowizard/pwiz/data/common/ParamTypes.hpp" #include "/usr/include/proteowizard/pwiz/data/common/Unimod.hpp" #include "/usr/include/proteowizard/pwiz/data/common/cv.hpp" #include "/usr/include/proteowizard/pwiz/data/common/diff_std.hpp" #include "/usr/include/proteowizard/pwiz/data/common/obo.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/DefaultReaderList.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/DelimReader.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/DelimWriter.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/Diff.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/IO.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/IdentData.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/IdentDataFile.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/KwCVMap.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/MascotReader.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/MzidPredicates.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/Pep2MzIdent.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/Reader.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/References.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/Serializer_Text.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/Serializer_mzid.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/Serializer_pepXML.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/Serializer_protXML.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/TextWriter.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/Version.hpp" #include "/usr/include/proteowizard/pwiz/data/identdata/examples.hpp" #include "/usr/include/proteowizard/pwiz/data/misc/CalibrationParameters.hpp" #include "/usr/include/proteowizard/pwiz/data/misc/FrequencyData.hpp" #include "/usr/include/proteowizard/pwiz/data/misc/FrequencyDataTestData.hpp" #include "/usr/include/proteowizard/pwiz/data/misc/MinimumPepXML.hpp" #include "/usr/include/proteowizard/pwiz/data/misc/PeakData.hpp" #include "/usr/include/proteowizard/pwiz/data/misc/SampleDatum.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/BinaryDataEncoder.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/ChromatogramListBase.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/ChromatogramList_mzML.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/DefaultReaderList.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/Diff.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/IO.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/Index_mzML.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/LegacyAdapter.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/MSData.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/MSDataFile.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/MSDataMerger.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/MSNumpress.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/MemoryMRUCache.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/Reader.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/References.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SHA1OutputObserver.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/Serializer_MGF.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/Serializer_MSn.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/Serializer_mzML.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/Serializer_mzXML.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumInfo.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumIterator.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumListBase.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumListCache.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumListWrapper.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumList_BTDX.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumList_MGF.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumList_MSn.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumList_mzML.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumList_mzXML.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/SpectrumWorkerThreads.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/TextWriter.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/Version.hpp" #include "/usr/include/proteowizard/pwiz/data/msdata/examples.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/AminoAcid.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/DefaultReaderList.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/Diff.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/Digestion.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/Modification.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/Peptide.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/ProteinListCache.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/ProteinListWrapper.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/ProteomeData.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/ProteomeDataFile.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/Reader.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/Reader_FASTA.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/Serializer_FASTA.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/TextWriter.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/Version.hpp" #include "/usr/include/proteowizard/pwiz/data/proteome/examples.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/DefaultReaderList.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/Diff.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/IO.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/Reader.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/References.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/Serializer_traML.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/TextWriter.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/TraData.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/TraDataFile.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/Version.hpp" #include "/usr/include/proteowizard/pwiz/data/tradata/examples.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/ABI/ChromatogramList_ABI.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/ABI/Reader_ABI.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/ABI/Reader_ABI_Detail.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/ABI/SpectrumList_ABI.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/ABI/T2D/SpectrumList_ABI_T2D.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Agilent/ChromatogramList_Agilent.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Agilent/Reader_Agilent.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Agilent/SpectrumList_Agilent.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Bruker/ChromatogramList_Bruker.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Bruker/Reader_Bruker.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Bruker/Reader_Bruker_Detail.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Bruker/SpectrumList_Bruker.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/ExtendedReaderList.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Shimadzu/ChromatogramList_Shimadzu.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Shimadzu/Reader_Shimadzu.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Shimadzu/SpectrumList_Shimadzu.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Thermo/ChromatogramList_Thermo.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Thermo/Reader_Thermo.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Thermo/Reader_Thermo_Detail.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Thermo/SpectrumList_Thermo.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/UIMF/Reader_UIMF.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/UIMF/SpectrumList_UIMF.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/UNIFI/Reader_UNIFI.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/UNIFI/Reader_UNIFI_Detail.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/UNIFI/SpectrumList_UNIFI.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Waters/ChromatogramList_Waters.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Waters/Reader_Waters.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Waters/Reader_Waters_Detail.hpp" #include "/usr/include/proteowizard/pwiz/data/vendor_readers/Waters/SpectrumList_Waters.hpp" #include "/usr/include/proteowizard/pwiz/utility/chemistry/Chemistry.hpp" #include "/usr/include/proteowizard/pwiz/utility/chemistry/ChemistryData.hpp" #include "/usr/include/proteowizard/pwiz/utility/chemistry/Ion.hpp" #include "/usr/include/proteowizard/pwiz/utility/chemistry/IsotopeCalculator.hpp" #include "/usr/include/proteowizard/pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp" #include "/usr/include/proteowizard/pwiz/utility/chemistry/IsotopeTable.hpp" #include "/usr/include/proteowizard/pwiz/utility/chemistry/MZTolerance.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/base.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/constants.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/copyif.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/cumsum.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/diff.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/interpolate.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/scale.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/utilities/base.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/base/utilities/interpolation.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/filter/filter.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/filter/gaussfilter.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/filter/utilities/gauss.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/filter/utilities/mexhat.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/filter/utilities/preparedata.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/ms/peakpickerqtof.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/ms/simplepicker.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/resample/bin1d.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/resample/breakspec.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/resample/bucket1d.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/resample/convert2dense.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/resample/determinebinwidth.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/resample/masscomparefunctors.hpp" #include "/usr/include/proteowizard/pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/HouseholderQR.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/LinearLeastSquares.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/LinearSolver.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/MatchedFilter.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/MatrixInverse.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/OrderedPair.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/Parabola.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/Stats.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/Types.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/erf.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/qr.hpp" #include "/usr/include/proteowizard/pwiz/utility/math/round.hpp" #include "/usr/include/proteowizard/pwiz/utility/minimxml/SAXParser.hpp" #include "/usr/include/proteowizard/pwiz/utility/minimxml/XMLWriter.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Base64.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/BinaryData.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/CharIndexedVector.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/ClickwrapPrompter.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Container.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/DateTime.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Environment.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Exception.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Export.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Filesystem.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Image.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/IntegerSet.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/IterationListener.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/MSIHandler.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Once.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/SHA1.h" #include "/usr/include/proteowizard/pwiz/utility/misc/SHA1Calculator.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/SHA1_ostream.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Singleton.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Std.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Stream.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/String.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/TabReader.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/Timer.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/VendorReaderTestHarness.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/almost_equal.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/cpp_cli_utilities.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/endian.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/mru_list.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/optimized_lexical_cast.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/pinned_gcroot.h" #include "/usr/include/proteowizard/pwiz/utility/misc/random_access_compressed_ifstream.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/shared_map.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/unit.hpp" #include "/usr/include/proteowizard/pwiz/utility/misc/virtual_map.hpp" #include "/usr/include/proteowizard/pwiz/utility/proteome/IPIFASTADatabase.hpp" #include "/usr/include/proteowizard/pwiz_tools/common/FullReaderList.hpp" #include "/usr/include/proteowizard/pwiz_tools/common/MSDataAnalyzerApplication.hpp" // add namespaces namespace Eigen{typedef int tmp_add_type_1;} Eigen::tmp_add_type_1 tmp_add_func_1(){return 0;}; namespace Eigen{namespace internal{typedef int tmp_add_type_2;}} Eigen::internal::tmp_add_type_2 tmp_add_func_2(){return 0;}; The GCC parameters: gcc -fdump-lang-raw -fkeep-inline-functions -c -x c++ -fpermissive -w "/tmp/z0sztvUUAl/dump1.h" -I/usr/include/proteowizard/libraries/boost_aux -I/usr/include/proteowizard/libraries/CSpline -I/usr/include/proteowizard In file included from /tmp/z0sztvUUAl/dump1.h:14: /usr/include/proteowizard/libraries/boost_aux/boost/enum/base.hpp:20:10: fatal error: boost/operators.hpp: No such file or directory 20 | #include | ^~~~~~~~~~~~~~~~~~~~~ compilation terminated.