Temporary header file '/tmp/Nx8Fo4_K_s/dump1.h' with the following content will be compiled to create GCC translation unit dump: // add defines #define __STDC_VERSION__ 201710L #define _TIME_BITS 64 #define _FILE_OFFSET_BITS 64 #define _GXX_NULLPTR_T #define CLUTTER_ENABLE_COMPOSITOR_API 1 #define _REGEX_NELTS(n) #define _Atomic #define PACKED #define getaddrinfo_a(a,b,c,d) // add includes #include "/usr/include/Bpp/Seq/Alphabet/AbstractAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/Alphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/AlphabetExceptions.h" #include "/usr/include/Bpp/Seq/Alphabet/AlphabetNumericState.h" #include "/usr/include/Bpp/Seq/Alphabet/AlphabetState.h" #include "/usr/include/Bpp/Seq/Alphabet/AlphabetTools.h" #include "/usr/include/Bpp/Seq/Alphabet/BinaryAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/CaseMaskedAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/CodonAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/DNA.h" #include "/usr/include/Bpp/Seq/Alphabet/DefaultAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/IntegerAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/LetterAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/LexicalAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/NucleicAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/NucleicAlphabetState.h" #include "/usr/include/Bpp/Seq/Alphabet/NumericAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/ProteicAlphabet.h" #include "/usr/include/Bpp/Seq/Alphabet/ProteicAlphabetState.h" #include "/usr/include/Bpp/Seq/Alphabet/RNA.h" #include "/usr/include/Bpp/Seq/Alphabet/RNY.h" #include "/usr/include/Bpp/Seq/Alphabet/WordAlphabet.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAChargeIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAChenGuHuangHydrophobicityIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanAHelixIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanBSheetIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanTurnIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAMassIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AASEA1030Index.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AASEAInf10Index.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AASEASup30Index.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AASurfaceIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AAVolumeIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/BLOSUM50.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAPolarityIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAVolumeIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/KleinAANetChargeIndex.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/SimpleIndexDistance.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/SimpleScore.h" #include "/usr/include/Bpp/Seq/AlphabetIndex/UserAlphabetIndex1.h" #include "/usr/include/Bpp/Seq/App/SequenceApplicationTools.h" #include "/usr/include/Bpp/Seq/CodonSiteTools.h" #include "/usr/include/Bpp/Seq/Container/AbstractSequenceContainer.h" #include "/usr/include/Bpp/Seq/Container/AlignedSequenceContainer.h" #include "/usr/include/Bpp/Seq/Container/CompressedVectorSiteContainer.h" #include "/usr/include/Bpp/Seq/Container/MapSequenceContainer.h" #include "/usr/include/Bpp/Seq/Container/OrderedSequenceContainer.h" #include "/usr/include/Bpp/Seq/Container/SequenceContainer.h" #include "/usr/include/Bpp/Seq/Container/SequenceContainerExceptions.h" #include "/usr/include/Bpp/Seq/Container/SequenceContainerIterator.h" #include "/usr/include/Bpp/Seq/Container/SequenceContainerTools.h" #include "/usr/include/Bpp/Seq/Container/SiteContainer.h" #include "/usr/include/Bpp/Seq/Container/SiteContainerExceptions.h" #include "/usr/include/Bpp/Seq/Container/SiteContainerIterator.h" #include "/usr/include/Bpp/Seq/Container/SiteContainerTools.h" #include "/usr/include/Bpp/Seq/Container/VectorSequenceContainer.h" #include "/usr/include/Bpp/Seq/Container/VectorSiteContainer.h" #include "/usr/include/Bpp/Seq/CoreSequence.h" #include "/usr/include/Bpp/Seq/CoreSite.h" #include "/usr/include/Bpp/Seq/DNAToRNA.h" #include "/usr/include/Bpp/Seq/DistanceMatrix.h" #include "/usr/include/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.h" #include "/usr/include/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.h" #include "/usr/include/Bpp/Seq/GeneticCode/GeneticCode.h" #include "/usr/include/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.h" #include "/usr/include/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.h" #include "/usr/include/Bpp/Seq/GeneticCode/StandardGeneticCode.h" #include "/usr/include/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.h" #include "/usr/include/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.h" #include "/usr/include/Bpp/Seq/Io/AbstractIAlignment.h" #include "/usr/include/Bpp/Seq/Io/AbstractISequence.h" #include "/usr/include/Bpp/Seq/Io/AbstractOAlignment.h" #include "/usr/include/Bpp/Seq/Io/AbstractOSequence.h" #include "/usr/include/Bpp/Seq/Io/BppOAlignmentReaderFormat.h" #include "/usr/include/Bpp/Seq/Io/BppOAlignmentWriterFormat.h" #include "/usr/include/Bpp/Seq/Io/BppOAlphabetIndex1Format.h" #include "/usr/include/Bpp/Seq/Io/BppOAlphabetIndex2Format.h" #include "/usr/include/Bpp/Seq/Io/BppOSequenceReaderFormat.h" #include "/usr/include/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.h" #include "/usr/include/Bpp/Seq/Io/BppOSequenceWriterFormat.h" #include "/usr/include/Bpp/Seq/Io/Clustal.h" #include "/usr/include/Bpp/Seq/Io/Dcse.h" #include "/usr/include/Bpp/Seq/Io/Fasta.h" #include "/usr/include/Bpp/Seq/Io/GenBank.h" #include "/usr/include/Bpp/Seq/Io/ISequence.h" #include "/usr/include/Bpp/Seq/Io/ISequenceStream.h" #include "/usr/include/Bpp/Seq/Io/IoSequence.h" #include "/usr/include/Bpp/Seq/Io/IoSequenceFactory.h" #include "/usr/include/Bpp/Seq/Io/IoSequenceStream.h" #include "/usr/include/Bpp/Seq/Io/Mase.h" #include "/usr/include/Bpp/Seq/Io/MaseTools.h" #include "/usr/include/Bpp/Seq/Io/NexusIoSequence.h" #include "/usr/include/Bpp/Seq/Io/NexusTools.h" #include "/usr/include/Bpp/Seq/Io/OSequence.h" #include "/usr/include/Bpp/Seq/Io/OSequenceStream.h" #include "/usr/include/Bpp/Seq/Io/PhredPhd.h" #include "/usr/include/Bpp/Seq/Io/PhredPoly.h" #include "/usr/include/Bpp/Seq/Io/Phylip.h" #include "/usr/include/Bpp/Seq/Io/SequenceFileIndex.h" #include "/usr/include/Bpp/Seq/Io/Stockholm.h" #include "/usr/include/Bpp/Seq/Io/StreamSequenceIterator.h" #include "/usr/include/Bpp/Seq/NucleicAcidsReplication.h" #include "/usr/include/Bpp/Seq/Sequence.h" #include "/usr/include/Bpp/Seq/SequenceExceptions.h" #include "/usr/include/Bpp/Seq/SequenceIterator.h" #include "/usr/include/Bpp/Seq/SequencePositionIterators.h" #include "/usr/include/Bpp/Seq/SequenceTools.h" #include "/usr/include/Bpp/Seq/SequenceWalker.h" #include "/usr/include/Bpp/Seq/SequenceWithAnnotation.h" #include "/usr/include/Bpp/Seq/SequenceWithAnnotationTools.h" #include "/usr/include/Bpp/Seq/SequenceWithQuality.h" #include "/usr/include/Bpp/Seq/SequenceWithQualityTools.h" #include "/usr/include/Bpp/Seq/Site.h" #include "/usr/include/Bpp/Seq/SiteExceptions.h" #include "/usr/include/Bpp/Seq/SiteIterator.h" #include "/usr/include/Bpp/Seq/SiteTools.h" #include "/usr/include/Bpp/Seq/StringSequenceTools.h" #include "/usr/include/Bpp/Seq/SymbolList.h" #include "/usr/include/Bpp/Seq/SymbolListTools.h" #include "/usr/include/Bpp/Seq/Transliterator.h" // add namespaces namespace bpp{typedef int tmp_add_type_1;} bpp::tmp_add_type_1 tmp_add_func_1(){return 0;}; namespace bpp{namespace TextTools{typedef int tmp_add_type_2;}} bpp::TextTools::tmp_add_type_2 tmp_add_func_2(){return 0;}; // add classes _G_fpos64_t* tmp_add_class_0; _G_fpos_t* tmp_add_class_1; _IO_cookie_io_functions_t* tmp_add_class_2; The GCC parameters: gcc -fdump-lang-raw -fkeep-inline-functions -c -x c++ -fpermissive -w "/tmp/Nx8Fo4_K_s/dump1.h"